data analysis spatial transcriptomic experiment (10X Genomics)
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10X Genomics
data analysis spatial transcriptomic experiment
Data Analysis Spatial Transcriptomic Experiment, supplied by 10X Genomics, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/analysis+spatial+transcriptomics/pm42226209-88-10-38
Average 86 stars, based on 1 article reviews
Data Analysis Spatial Transcriptomic Experiment, supplied by 10X Genomics, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/analysis+spatial+transcriptomics/pm42226209-88-10-38
Average 86 stars, based on 1 article reviews
data analysis spatial transcriptomic experiment - by Bioz Stars,
2026-10
86/100 stars
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other:Article Title: Multi-modal refinement of the human heart atlas during the first gestational trimester Article Snippet: As transcriptomics of single nuclei is high-resolution but sparse, and removes informative positional information from samples, we also undertook DNA Sequencing:Article Title: Single-nucleus and spatial landscape of the sub-ventricular zone in human glioblastoma. Article Snippet: .. STAR+METHODS Detailed methods are provided in the online version of this paper and include the following: d KEY RESOURCES TABLE d EXPERIMENTAL MODEL AND STUDY PARTICIPANT DETAILS B Glioblastoma patient samples B Establishment and propagation of patient-derived cancer stem-like cells B Establishment of patient-derived tumor-associated macrophages d METHOD DETAILS B 5-ALA administration and patient sample collection B Genomic DNA sequencing B Mutation, copy-number and gene expression data B Single-nucleus RNA-sequencing B Definition of malignant cells B Cellular dynamics B Gene regulatory networks B Identification of differentially expressed genes B Expression analysis of the SCENIC-identified ZEB1 targets B Cell-cell interaction analysis B Pathway and Mutagenesis:Article Title: Single-nucleus and spatial landscape of the sub-ventricular zone in human glioblastoma. Article Snippet: .. STAR+METHODS Detailed methods are provided in the online version of this paper and include the following: d KEY RESOURCES TABLE d EXPERIMENTAL MODEL AND STUDY PARTICIPANT DETAILS B Glioblastoma patient samples B Establishment and propagation of patient-derived cancer stem-like cells B Establishment of patient-derived tumor-associated macrophages d METHOD DETAILS B 5-ALA administration and patient sample collection B Genomic DNA sequencing B Mutation, copy-number and gene expression data B Single-nucleus RNA-sequencing B Definition of malignant cells B Cellular dynamics B Gene regulatory networks B Identification of differentially expressed genes B Expression analysis of the SCENIC-identified ZEB1 targets B Cell-cell interaction analysis B Pathway and Gene Expression:Article Title: Single-nucleus and spatial landscape of the sub-ventricular zone in human glioblastoma. Article Snippet: .. STAR+METHODS Detailed methods are provided in the online version of this paper and include the following: d KEY RESOURCES TABLE d EXPERIMENTAL MODEL AND STUDY PARTICIPANT DETAILS B Glioblastoma patient samples B Establishment and propagation of patient-derived cancer stem-like cells B Establishment of patient-derived tumor-associated macrophages d METHOD DETAILS B 5-ALA administration and patient sample collection B Genomic DNA sequencing B Mutation, copy-number and gene expression data B Single-nucleus RNA-sequencing B Definition of malignant cells B Cellular dynamics B Gene regulatory networks B Identification of differentially expressed genes B Expression analysis of the SCENIC-identified ZEB1 targets B Cell-cell interaction analysis B Pathway and Article Title: Spatial transcriptomics implicates the thalamus and cortex in autism and schizophrenia Article Snippet: We mounted 4 such sections from 1 brain on a Visium Spatial Gene Expression Slide (10x Genomics, 1000187) and stored at -80°C until further processing. .. Spatial transcriptomics analysis was performed using the 10x Genomics Article Title: Spatial lipidomics reveals sphingolipid metabolism as anti-fibrotic target in the liver. Article Snippet: .. Analysis of published RNA sequencing:Article Title: Single-nucleus and spatial landscape of the sub-ventricular zone in human glioblastoma. Article Snippet: .. STAR+METHODS Detailed methods are provided in the online version of this paper and include the following: d KEY RESOURCES TABLE d EXPERIMENTAL MODEL AND STUDY PARTICIPANT DETAILS B Glioblastoma patient samples B Establishment and propagation of patient-derived cancer stem-like cells B Establishment of patient-derived tumor-associated macrophages d METHOD DETAILS B 5-ALA administration and patient sample collection B Genomic DNA sequencing B Mutation, copy-number and gene expression data B Single-nucleus RNA-sequencing B Definition of malignant cells B Cellular dynamics B Gene regulatory networks B Identification of differentially expressed genes B Expression analysis of the SCENIC-identified ZEB1 targets B Cell-cell interaction analysis B Pathway and Expressing:Article Title: Single-nucleus and spatial landscape of the sub-ventricular zone in human glioblastoma. Article Snippet: .. STAR+METHODS Detailed methods are provided in the online version of this paper and include the following: d KEY RESOURCES TABLE d EXPERIMENTAL MODEL AND STUDY PARTICIPANT DETAILS B Glioblastoma patient samples B Establishment and propagation of patient-derived cancer stem-like cells B Establishment of patient-derived tumor-associated macrophages d METHOD DETAILS B 5-ALA administration and patient sample collection B Genomic DNA sequencing B Mutation, copy-number and gene expression data B Single-nucleus RNA-sequencing B Definition of malignant cells B Cellular dynamics B Gene regulatory networks B Identification of differentially expressed genes B Expression analysis of the SCENIC-identified ZEB1 targets B Cell-cell interaction analysis B Pathway and Spatial Transcriptomics:Article Title: Single-nucleus and spatial landscape of the sub-ventricular zone in human glioblastoma. Article Snippet: .. STAR+METHODS Detailed methods are provided in the online version of this paper and include the following: d KEY RESOURCES TABLE d EXPERIMENTAL MODEL AND STUDY PARTICIPANT DETAILS B Glioblastoma patient samples B Establishment and propagation of patient-derived cancer stem-like cells B Establishment of patient-derived tumor-associated macrophages d METHOD DETAILS B 5-ALA administration and patient sample collection B Genomic DNA sequencing B Mutation, copy-number and gene expression data B Single-nucleus RNA-sequencing B Definition of malignant cells B Cellular dynamics B Gene regulatory networks B Identification of differentially expressed genes B Expression analysis of the SCENIC-identified ZEB1 targets B Cell-cell interaction analysis B Pathway and Article Title: Spatial transcriptomics implicates the thalamus and cortex in autism and schizophrenia Article Snippet: We mounted 4 such sections from 1 brain on a Visium Spatial Gene Expression Slide (10x Genomics, 1000187) and stored at -80°C until further processing. .. Spatial transcriptomics analysis was performed using the 10x Genomics Article Title: IFITM3-MET interaction drives osimertinib resistance through AKT pathway activation in EGFR -mutant non–small cell lung cancer Article Snippet: .. Spatial transcriptomics analysis was performed with the 10X Genomics Article Title: IFITM3-MET interaction drives osimertinib resistance through AKT pathway activation in EGFR-mutant non-small cell lung cancer. Article Snippet: .. Spatial transcriptomics analysis was performed with the 10X Genomics Article Title: Spatial lipidomics reveals sphingolipid metabolism as anti-fibrotic target in the liver. Article Snippet: .. Analysis of published Article Title: Spatial multiomics dissects the SARS-CoV-2-induced disruption of cell adhesion and immune dynamics in the human hippocampus. Article Snippet: .. Xenium in situ spatial transcriptomics To precisely map the spatial transcriptomic landscape within the human HP–EC following SARS-CoV-2 infection, we performed Enzyme-linked Immunosorbent Assay:Article Title: Single-nucleus and spatial landscape of the sub-ventricular zone in human glioblastoma. Article Snippet: .. STAR+METHODS Detailed methods are provided in the online version of this paper and include the following: d KEY RESOURCES TABLE d EXPERIMENTAL MODEL AND STUDY PARTICIPANT DETAILS B Glioblastoma patient samples B Establishment and propagation of patient-derived cancer stem-like cells B Establishment of patient-derived tumor-associated macrophages d METHOD DETAILS B 5-ALA administration and patient sample collection B Genomic DNA sequencing B Mutation, copy-number and gene expression data B Single-nucleus RNA-sequencing B Definition of malignant cells B Cellular dynamics B Gene regulatory networks B Identification of differentially expressed genes B Expression analysis of the SCENIC-identified ZEB1 targets B Cell-cell interaction analysis B Pathway and Immunofluorescence:Article Title: Single-nucleus and spatial landscape of the sub-ventricular zone in human glioblastoma. Article Snippet: .. STAR+METHODS Detailed methods are provided in the online version of this paper and include the following: d KEY RESOURCES TABLE d EXPERIMENTAL MODEL AND STUDY PARTICIPANT DETAILS B Glioblastoma patient samples B Establishment and propagation of patient-derived cancer stem-like cells B Establishment of patient-derived tumor-associated macrophages d METHOD DETAILS B 5-ALA administration and patient sample collection B Genomic DNA sequencing B Mutation, copy-number and gene expression data B Single-nucleus RNA-sequencing B Definition of malignant cells B Cellular dynamics B Gene regulatory networks B Identification of differentially expressed genes B Expression analysis of the SCENIC-identified ZEB1 targets B Cell-cell interaction analysis B Pathway and In Vitro:Article Title: Single-nucleus and spatial landscape of the sub-ventricular zone in human glioblastoma. Article Snippet: .. STAR+METHODS Detailed methods are provided in the online version of this paper and include the following: d KEY RESOURCES TABLE d EXPERIMENTAL MODEL AND STUDY PARTICIPANT DETAILS B Glioblastoma patient samples B Establishment and propagation of patient-derived cancer stem-like cells B Establishment of patient-derived tumor-associated macrophages d METHOD DETAILS B 5-ALA administration and patient sample collection B Genomic DNA sequencing B Mutation, copy-number and gene expression data B Single-nucleus RNA-sequencing B Definition of malignant cells B Cellular dynamics B Gene regulatory networks B Identification of differentially expressed genes B Expression analysis of the SCENIC-identified ZEB1 targets B Cell-cell interaction analysis B Pathway and Transcriptomics:Article Title: Spatial lipidomics reveals sphingolipid metabolism as anti-fibrotic target in the liver. Article Snippet: .. Analysis of published In Situ:Article Title: Spatial multiomics dissects the SARS-CoV-2-induced disruption of cell adhesion and immune dynamics in the human hippocampus. Article Snippet: .. Xenium in situ spatial transcriptomics To precisely map the spatial transcriptomic landscape within the human HP–EC following SARS-CoV-2 infection, we performed Infection:Article Title: Spatial multiomics dissects the SARS-CoV-2-induced disruption of cell adhesion and immune dynamics in the human hippocampus. Article Snippet: .. Xenium in situ spatial transcriptomics To precisely map the spatial transcriptomic landscape within the human HP–EC following SARS-CoV-2 infection, we performed Staining:Article Title: Spatial multiomics dissects the SARS-CoV-2-induced disruption of cell adhesion and immune dynamics in the human hippocampus. Article Snippet: .. Xenium in situ spatial transcriptomics To precisely map the spatial transcriptomic landscape within the human HP–EC following SARS-CoV-2 infection, we performed |
